miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|114791403|gb|EE887978.1|EE887978 GCGGGCCCAGAGGCGGTGTTTTGGGTGCTGGAGCGGGACTTGGATCTCACTCACTCACTCGGACGGGCGCGAACATGGCA
GCCGAGCCGGCCCAGGACACGGCCACCGCCTCCAGCTTCCAACACTTTGGGCTGCGCCACTTCCACCTCGACCTGCGGGT
GGATTTCGCCCAGCGGCAGCTGCAGGGCCGCGCGGCCTTGGAGCTGACCTGCCTGCGGGCCGGGGCCGGGGCCGGGGCCG
GCGACCACCGGCTCCGCCTGGACACTCACCCCAGCCTCATCGTGCGCTCCGTGTCGGCCAAGTGTGGCGATGGCGATGAT
GCCGCCCAGTCGGTGCCCCTGCCGCATGAAATCCAGCCCTTCACCAGCTACGGCTCCACCCTGGTGCTGACCTTACCAGG
CCCCTGTCGCCATGGCGACCAGCTACAGGTGGTCATCGACTACACCGCCAACGATGGACCCGGGATTTCCTGGCTTCATC
CAGTACAGACTGGCAACAAAGAGAAACCTTTCCTATATACGTCTGGCTTTCCTGTGCTCAATAGGTCTTTCTTTCCCTCC
TTCCACACTCCAGGCAGGAAGAGCACGT




Most similar to sp|Q8VCT3|AMPB_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8VCT3|AMPB_MOUSE Aminopeptidase B OS=Mus musculus GN=Rnpep PE=2
           SV=1
          Length = 650

 Score =  137 bits (345), Expect = 5e-32
 Identities = 75/174 (43%), Positives = 96/174 (55%), Gaps = 8/174 (4%)
 Frame = +3

Query: 90  AQDTATASSFQHFGLRHFHLDLRVDFA-------QRQLQGRAALELTCLRXXXXXXXXDH 248
           A D A+ASSF+ F + H HLDLR +F         R L G A LEL CL           
Sbjct: 22  AVDVASASSFRAFEILHLHLDLRAEFGPPGPGPGSRGLSGTATLELRCLLPEGAS----- 76

Query: 249 RLRLDTHPSLIVRSVSAKCGD-GDDAAQSVPLPHEIQPFTSYGSTLVLTLPGPCRHGDQL 425
            LRLD+H  L V + + + G  GD  A + P+P   QPF+ YG  L +  P PC   D+ 
Sbjct: 77  ELRLDSHSCLEVTAATLRRGQPGDQQAPAEPVPFHTQPFSHYGQALCVAFPQPCGAADRF 136

Query: 426 QVVIDYTANDGPGISWLHPVQTGNKEKPFLYTSGFPVLNRSFFPSFHTPGRKST 587
           ++ + Y   +GPG+ WL P QT  K+KPF+YT G  VLNR+FFP F TP  K T
Sbjct: 137 ELELTYRVGEGPGVCWLAPEQTAGKKKPFVYTQGQAVLNRAFFPCFDTPAVKCT 190